Gold166 analysis
Select for coloring
Choose variables for PCA:
Tree morphology
Select All
Reconstruction quality
Select All
Image quality
Select All
Select only volumes IQ
PCA
t-SNE
Clustering
Sholl
Persistent Homology
Distances
Select for cluster polygons (take into account that only the set of metric chosen will be used for the analysis)
Download Plot
Download Plot
Download Plot
Select for cluster polygons (take into account that only the set of metric chosen will be used for the analysis)
Please be patient, this can take up to 60 seconds
Download Plot
Download Plot
Choose an algorithm:
Download Plot
Download Plot
Download Plot
Choose a set:
Choose a cluster:
Choose a group of auto reconstructions:
Choose a Gold Standard tree for plotting:
Choose algorithm:
This analysis is only available for cross-species comparison of Gold standard reconstructions at the moment.
Download Plot
Download Plot
Download Plot
Click on any data point in the heatmap to see Persistent Homology plots for pairs of neurons. This analysis is only available for Gold standard reconstructions at the moment.
Select for x axis labels
Select for y axis labels
Choose a group of auto reconstructions:
Choose a set:
Choose a cluster:
Download Plot
Choose algorithm(s)
Select All
Choose dataset(s)
Select All
Choose a metric for filtering:
Select Range (% of max)
Specify uploaded reconstruction algorithm name
Choose SWC and their associated IQ files
Browse...